OSSIM - Open Source Software Image Map  Version 1.9.0 (20180803)
Public Member Functions | Protected Member Functions | Protected Attributes | Friends | List of all members
ossimHdf5ImageHandler Class Reference

This is the base class for all imagery using HDF5 as the file format. More...

#include <ossimHdf5ImageHandler.h>

Inheritance diagram for ossimHdf5ImageHandler:
ossimImageHandler ossimImageSource ossimSource ossimConnectableObject ossimErrorStatusInterface ossimObject ossimListenerManager ossimPropertyInterface ossimReferenced ossimViirsHandler ossimViirsHandler

Public Member Functions

 ossimHdf5ImageHandler ()
 default constructor More...
 
virtual ~ossimHdf5ImageHandler ()
 virtual destructor More...
 
virtual ossimString getShortName () const
 
virtual ossimString getLongName () const
 
virtual ossimString getClassName () const
 
virtual ossimRefPtr< ossimImageDatagetTile (const ossimIrect &rect, ossim_uint32 resLevel=0)
 Returns a pointer to a tile given an origin representing the upper left corner of the tile to grab from the image. More...
 
virtual bool getTile (ossimImageData *result, ossim_uint32 resLevel=0)
 Method to get a tile. More...
 
virtual ossim_uint32 getNumberOfInputBands () const
 Returns the number of bands in the image. More...
 
virtual ossim_uint32 getNumberOfOutputBands () const
 Returns the number of bands in a tile returned from this TileSource. More...
 
virtual ossim_uint32 getNumberOfLines (ossim_uint32 reduced_res_level=0) const
 Returns the number of lines in the image. More...
 
virtual ossim_uint32 getNumberOfSamples (ossim_uint32 reduced_res_level=0) const
 Returns the number of samples in the image. More...
 
virtual ossimIrect getImageRectangle (ossim_uint32 reduced_res_level=0) const
 Returns the zero based image rectangle for the reduced resolution data set (rrds) passed in. More...
 
virtual bool saveState (ossimKeywordlist &kwl, const char *prefix=0) const
 Method to save the state of an object to a keyword list. More...
 
virtual bool loadState (const ossimKeywordlist &kwl, const char *prefix=0)
 Method to the load (recreate) the state of an object from a keyword list. More...
 
virtual ossimScalarType getOutputScalarType () const
 Returns the output pixel type of the tile source. More...
 
virtual ossim_uint32 getImageTileWidth () const
 Returns the tile width of the image or 0 if the image is not tiled. More...
 
virtual ossim_uint32 getImageTileHeight () const
 Returns the tile width of the image or 0 if the image is not tiled. More...
 
virtual bool isOpen () const
 Derived classes must implement this method to be concrete. More...
 
virtual void close ()
 Close method. More...
 
virtual void loadMetaData ()
 There is an external file with an omd extension. More...
 
virtual ossim_uint32 getNumberOfEntries () const
 
virtual void getEntryNames (std::vector< ossimString > &entryNames) const
 Get the name of entry as a string. More...
 
virtual void getEntryList (std::vector< ossim_uint32 > &entryList) const
 
virtual bool setCurrentEntry (ossim_uint32 entryIdx)
 
virtual ossim_uint32 getCurrentEntry () const
 
ossimRefPtr< ossimHdf5ImageDatasetgetCurrentDataset ()
 
virtual double getNullPixelValue (ossim_uint32 band=0) const
 
virtual double getMaxPixelValue (ossim_uint32 band=0) const
 Returns the max pixel of the band. More...
 
virtual double getMinPixelValue (ossim_uint32 band=0) const
 Retuns the min pixel value. More...
 
virtual void setProperty (ossimRefPtr< ossimProperty > property)
 Set propterty method. More...
 
virtual ossimRefPtr< ossimPropertygetProperty (const ossimString &name) const
 Get propterty method. More...
 
virtual void getPropertyNames (std::vector< ossimString > &propertyNames) const
 Get propterty names. More...
 
virtual bool open ()
 The derived class needs to initialize the raster dataset names m_renderableNames in their constructor, for this method to work. More...
 
const std::vector< ossimString > & getRenderableSetNames ()
 
void addRenderable (const ossimString &datasetName)
 Adds the dataset name, either the full HDF5 path or the simple object name, to the list of renderable datasets. More...
 
- Public Member Functions inherited from ossimImageHandler
 ossimImageHandler ()
 Constructor (default): More...
 
virtual ~ossimImageHandler ()
 Destructor: Derived classes should implement. More...
 
virtual void initialize ()
 initialize Does nothing in this class. More...
 
virtual bool openOverview ()
 Searches for an overview. More...
 
virtual bool openOverview (const ossimFilename &overview_file)
 Calls closeOverview(), then attempts to open the overview_file. More...
 
virtual void closeOverview ()
 If theOverview is initialized it will be deleted and set to NULL. More...
 
virtual const ossimImageHandlergetOverview () const
 
virtual bool hasOverviews () const
 
virtual ossimFilename createDefaultOverviewFilename () const
 
virtual ossimFilename createDefaultGeometryFilename () const
 
virtual ossimFilename createDefaultMetadataFilename () const
 
virtual ossimFilename createDefaultHistogramFilename () const
 
virtual ossimFilename createDefaultValidVerticesFilename () const
 
virtual bool writeValidImageVertices (const std::vector< ossimIpt > &vertices, const ossimFilename &file=ossimFilename(""))
 Outputs vertices to file and updates the internal vertex array variable "theValidImageVertices". More...
 
virtual bool openValidVertices (const ossimFilename &vertices_file)
 Opens the valid image vertices file and sets theValidImageVerticesFile variable. More...
 
virtual bool openValidVertices ()
 Creates vertices file name based on image, then tries to open. More...
 
virtual bool open (const ossimFilename &imageFile, ossim_uint32 entryIndex)
 Opens the image file. More...
 
virtual bool open (const ossimFilename &imageFile)
 
virtual bool open (std::shared_ptr< ossim::ImageHandlerState > state)
 
virtual bool buildHistogram (int numberOfRLevels=0, ossimHistogramMode mode=OSSIM_HISTO_MODE_NORMAL)
 Build a histogram for image file. More...
 
virtual bool buildAllHistograms (int numberOfRLevels=0, ossimHistogramMode mode=OSSIM_HISTO_MODE_NORMAL)
 Build a histograms for all image entries. More...
 
virtual bool buildOverview (ossimImageHandlerOverviewCompressionType compressionType=OSSIM_OVERVIEW_COMPRESSION_NONE, ossim_uint32 quality=75, ossimFilterResampler::ossimFilterResamplerType resampleType=ossimFilterResampler::ossimFilterResampler_BOX, bool includeFullResFlag=false)
 Will build over file for theImageFile. More...
 
virtual bool buildAllOverviews (ossimImageHandlerOverviewCompressionType compressionType=OSSIM_OVERVIEW_COMPRESSION_NONE, ossim_uint32 quality=75, ossimFilterResampler::ossimFilterResamplerType resampleType=ossimFilterResampler::ossimFilterResampler_BOX, bool includeFullResFlag=false)
 Will build over file for all image entries. More...
 
virtual bool buildOverview (const ossimFilename &filename, ossimImageHandlerOverviewCompressionType compressionType=OSSIM_OVERVIEW_COMPRESSION_NONE, ossim_uint32 quality=75, ossimFilterResampler::ossimFilterResamplerType resampleType=ossimFilterResampler::ossimFilterResampler_BOX, bool includeFullResFlag=false)
 Will build an over file for filename. More...
 
ossimRefPtr< ossimMultiResLevelHistogramgetImageHistogram () const
 Fetches the current entry image's histogram. More...
 
virtual ossimRefPtr< ossimImageGeometrygetImageGeometry ()
 Returns the image geometry object associated with this tile source or NULL if non defined. More...
 
virtual void setImageGeometry (ossimImageGeometry *geom)
 Sets the image geometry object. More...
 
virtual void saveImageGeometry () const
 Saves the image geometry to a file that will be made based on the image file name. More...
 
virtual void saveImageGeometry (const ossimFilename &geometry_file) const
 Saves the image geometry to a file that will be made based on the image file name. More...
 
virtual ossimIrect getBoundingRect (ossim_uint32 resLevel=0) const
 Returns zero-based bounding rectangle of the image. More...
 
virtual void getDecimationFactor (ossim_uint32 resLevel, ossimDpt &result) const
 
virtual void getDecimationFactors (vector< ossimDpt > &decimations) const
 This returns all decimation for all levels. More...
 
virtual ossim_uint32 getNumberOfDecimationLevels () const
 This returns the total number of decimation levels. More...
 
virtual ossim_uint32 getNumberOfReducedResSets () const
 This method is obsolete. More...
 
virtual void setFilename (const ossimFilename &filename)
 Sets the filename. More...
 
virtual const ossimFilenamegetFilename () const
 Returns the filename. More...
 
virtual bool isValidRLevel (ossim_uint32 resLevel) const
 Determines if the passed in reslution level is valid. More...
 
bool canConnectMyInputTo (ossim_int32 inputIndex, const ossimConnectableObject *object) const
 Connection rule. More...
 
virtual void getValidImageVertices (vector< ossimIpt > &validVertices, ossimVertexOrdering ordering=OSSIM_CLOCKWISE_ORDER, ossim_uint32 resLevel=0) const
 ordering specifies how the vertices should be arranged. More...
 
virtual bool isBandSelector () const
 Indicates whether or not the image handler can control output band selection via the setOutputBandList method. More...
 
virtual bool setOutputBandList (const std::vector< ossim_uint32 > &band_list)
 If the image handler "isBandSeletor()" then the band selection of the output chip can be controlled. More...
 
virtual bool setOutputToInputBandList ()
 If the image handler "isBandSeletor()" then the band selection of the output are set to input or identity. More...
 
virtual bool isIdentityBandList (const std::vector< ossim_uint32 > &bandList) const
 Convenience method to see if band list is identity. More...
 
virtual bool isImageTiled () const
 Indicates whether or not the image is tiled internally. More...
 
virtual bool hasMetaData () const
 
virtual ossimRefPtr< ossimNBandLutDataObjectgetLut () const
 
virtual bool hasLut () const
 
virtual void setMinPixelValue (ossim_uint32 band, const ossim_float64 &pix)
 convenience method to set min pixel value. More...
 
virtual void setMaxPixelValue (ossim_uint32 band, const ossim_float64 &pix)
 convenience method to set max pixel value. More...
 
virtual void setNullPixelValue (ossim_uint32 band, const ossim_float64 &pix)
 convenience method to set null pixel value. More...
 
virtual void getEntryName (ossim_uint32 entryIdx, std::string &name) const
 Get the name of entry as a string. More...
 
bool useEntryIndex () const
 Convenience method to determine if entry index should be used for support files, e.g. More...
 
ossimFilename getOverviewFile () const
 
ossimFilename getFilenameWithThisExtension (const ossimString &ext, bool set_e0_prefix=false) const
 Returns the image file with extension set using supplentary directory for dirname if set. More...
 
void getFilenameWithThisExt (const ossimString &ext, ossimFilename &f) const
 Returns the image file with extension set using supplentary directory for dirname if set. More...
 
ossim_uint32 getStartingResLevel () const
 
void setStartingResLevel (ossim_uint32 level)
 
bool getOpenOverviewFlag () const
 
void setOpenOverviewFlag (bool flag)
 Sets theOpenOverviewFlag. More...
 
virtual void setSupplementaryDirectory (const ossimFilename &dir)
 Sets the supplementary directory. More...
 
virtual const ossimFilenamegetSupplementaryDirectory () const
 Returns the supplementary directory. More...
 
const ossimStringgetImageID () const
 Fetches the image ID. More...
 
void setImageID (const ossimString &id)
 Sets the image ID in case it is externally generated. More...
 
ossimPixelType getPixelType () const
 Returns the raster pixel alignment type. More...
 
virtual bool getRgbBandList (std::vector< ossim_uint32 > &bandList) const
 Convenience method to get the zero based rgb output band list. More...
 
template<class T >
std::shared_ptr< T > getStateAs ()
 
template<class T >
std::shared_ptr< const T > getStateAs () const
 
std::shared_ptr< ossim::ImageHandlerState > getState ()
 
std::shared_ptr< const ossim::ImageHandlerState > getState () const
 
void setState (std::shared_ptr< ossim::ImageHandlerState > state)
 
- Public Member Functions inherited from ossimImageSource
 ossimImageSource (ossimObject *owner=0)
 
 ossimImageSource (ossimObject *owner, ossim_uint32 inputListSize, ossim_uint32 outputListSize, bool inputListIsFixedFlag=true, bool outputListIsFixedFlag=true)
 
virtual ~ossimImageSource ()
 
virtual ossimRefPtr< ossimImageDatagetTile (const ossimIpt &origin, ossim_uint32 resLevel=0)
 
virtual ossimObjectgetObject ()
 For RTTI support. More...
 
virtual const ossimObjectgetObject () const
 For RTTI support. More...
 
virtual void getDecimationFactors (std::vector< ossimDpt > &decimations) const
 Will return an array of all decimations for each resolution level. More...
 
virtual void getOutputBandList (std::vector< ossim_uint32 > &bandList) const
 Initializes bandList. More...
 
virtual ossim_uint32 getTileWidth () const
 Returns the default processing tile width. More...
 
virtual ossim_uint32 getTileHeight () const
 Returns the default processing tile height. More...
 
virtual void getBoundingRect (ossimIrect &rect, ossim_uint32 resLevel=0) const
 Gets the bounding rectangle of the source. More...
 
virtual void getValidImageVertices (std::vector< ossimIpt > &validVertices, ossimVertexOrdering ordering=OSSIM_CLOCKWISE_ORDER, ossim_uint32 resLevel=0) const
 ordering specifies how the vertices should be arranged. More...
 
virtual void setImageGeometry (const ossimImageGeometry *geom)
 Default implementation sets geometry of the first input to the geometry specified. More...
 
virtual bool isIndexedData () const
 
- Public Member Functions inherited from ossimSource
 ossimSource (ossimObject *owner=0)
 
 ossimSource (ossimObject *owner, ossim_uint32 inputListSize, ossim_uint32 outputListSize, bool inputListIsFixedFlag=true, bool outputListIsFixedFlag=true)
 
virtual ~ossimSource ()
 
virtual bool isSourceEnabled () const
 
virtual void enableSource ()
 
virtual void disableSource ()
 
virtual bool getEnableFlag () const
 
virtual void setEnableFlag (bool flag)
 
virtual bool isInitialized () const
 
virtual void setInitializedFlag (bool flag)
 
virtual std::ostream & print (std::ostream &out) const
 Outputs theErrorStatus as an ossimErrorCode and an ossimString. More...
 
- Public Member Functions inherited from ossimConnectableObject
 ossimConnectableObject (ossimObject *owner=0)
 Base constructor of this object. More...
 
 ossimConnectableObject (ossimObject *owner, ossim_int32 inputListSize, ossim_int32 outputListSize, bool inputListIsFixedFlag=true, bool outputListIsFixedFlag=true)
 
virtual ~ossimConnectableObject ()
 
void setId (const ossimId &id)
 All connectable objects will have id's. More...
 
const ossimIdgetId () const
 Will allow us to get this object's id. More...
 
const ossimObjectgetOwner () const
 Fetches the current owner, most likely a container but not limited to one. More...
 
virtual void changeOwner (ossimObject *owner)
 Permits changing the object's owner. More...
 
virtual void setDescription (const ossimString &description)
 
virtual ossimString getDescription () const
 
virtual bool isConnected (ossimConnectableObjectDirectionType direction=CONNECTABLE_DIRECTION_INPUT) const
 will check the direction specified to see if all slots are full. More...
 
 OSSIM_DEPRECATE_METHOD (virtual ossimConnectableObject *findConnectableObject(const ossimId &id))
 
 OSSIM_DEPRECATE_METHOD (virtual ossimConnectableObject *findObjectOfType(RTTItypeid typeId, ossimConnectableObjectDirectionType directionType, bool recurse=true))
 
 OSSIM_DEPRECATE_METHOD (virtual ossimConnectableObject *findObjectOfType(const ossimString &obj, ossimConnectableObjectDirectionType directionType, bool recurse=true))
 
 OSSIM_DEPRECATE_METHOD (virtual ossimConnectableObject *findInputObjectOfType(const ossimString &className))
 
virtual ossim_int32 findInputIndex (const ossimConnectableObject *object)
 Return a valid index of the input list if the passed in object is found else return -1. More...
 
virtual ossim_int32 findInputIndex (const ossimId &id)
 Return a valid index of the input list if the passed id is found else return -1. More...
 
virtual ossim_int32 findOutputIndex (const ossimConnectableObject *object)
 Return a valid index of the output list if the passed in object is found else return -1. More...
 
virtual ossim_int32 findOutputIndex (const ossimId &id)
 Return a valid index of the output list if the passed in object is found else return -1. More...
 
virtual ossim_int32 getMyInputIndexToConnectTo (ossimConnectableObject *object) const
 Should return the first available index to connect to. More...
 
virtual ossim_int32 getMyOutputIndexToConnectTo (ossimConnectableObject *object) const
 Should return the first available index to connect to. More...
 
virtual bool canConnectMyOutputTo (ossim_int32 myOutputIndex, const ossimConnectableObject *object) const
 default implementation is to allow anyone to connect to us. More...
 
virtual void disconnect (ossimConnectableObject *object=0)
 Will disconnect the object passed in. More...
 
virtual void disconnect (const ossimId &id)
 Will disconnect the object passed in. More...
 
virtual ossimRefPtr< ossimConnectableObjectdisconnectMyInput (ossim_int32 inputIndex, bool disconnectOutputFlag=true, bool createEventFlag=true)
 Will disconnect the object at the given input index and generate a connection event. More...
 
virtual void disconnectMyInput (ossimConnectableObject *input, bool disconnectOutputFlag=true, bool createEventFlag=true)
 Finds the index of the passed in input and calls disconnectMyInput(inputIndex, disconnectOutputFlag, createEventFlag);. More...
 
virtual void disconnectMyInputs (ConnectableObjectList &inputList, bool disconnectOutputFlag=true, bool createEventFlag=true)
 
virtual ossimRefPtr< ossimConnectableObjectdisconnectMyOutput (ossim_int32 outputIndex, bool disconnectInputFlag=true, bool createEventFlag=true)
 Will disconnect the object at the given output index and generate a connection event. More...
 
virtual void disconnectMyOutput (ossimConnectableObject *output, bool disconnectInputFlag=true, bool createEventFlag=true)
 Will disconnect the output object. More...
 
virtual void disconnectMyOutputs (ConnectableObjectList &outputList, bool disconnectOutputFlag=true, bool createEventFlag=true)
 
virtual void disconnectAllInputs ()
 Will disconnect all of the input objects. More...
 
virtual void disconnectAllOutputs ()
 Will disconnect all of the output objects. More...
 
virtual ossim_int32 connectMyInputTo (ossimConnectableObject *inputObject, bool makeOutputConnection=true, bool createEventFlag=true)
 Will try to connect this objects input to the passed in object. More...
 
virtual ossim_int32 connectMyInputTo (ossim_int32 inputIndex, ossimConnectableObject *inputObject, bool makeOutputConnection=true, bool createEventFlag=true)
 Will connect the specified input to the passed in object. More...
 
virtual bool connectMyInputTo (ConnectableObjectList &inputList, bool makeOutputConnection=true, bool createEventFlag=true)
 
virtual ossim_int32 connectMyOutputTo (ossimConnectableObject *outputObject, bool makeInputConnection=true, bool createEventFlag=true)
 Will try to connect this objects output to the passed in object. More...
 
virtual bool connectMyOutputTo (ConnectableObjectList &outputList, bool makeInputConnection=true, bool createEventFlag=true)
 
virtual bool connectInputList (ConnectableObjectList &inputList)
 Will disconnect itself from all inputs and reset to the passed in input list. More...
 
virtual bool connectOutputList (ConnectableObjectList &outputList)
 Will disconnect itself from all outputs and reset to the passed in output list. More...
 
virtual ossim_uint32 getNumberOfInputs () const
 Returns the number of input objects. More...
 
virtual ossim_uint32 getNumberOfOutputs () const
 Return the number of output objects. More...
 
ossimConnectableObjectgetInput (ossim_uint32 index=0)
 returns the object at the specified index. More...
 
const ossimConnectableObjectgetInput (ossim_uint32 index=0) const
 returns the object at the specified index. More...
 
ossimConnectableObjectgetOutput (ossim_uint32 index=0)
 returns the object at the specified index. More...
 
const ossimConnectableObjectgetOutput (ossim_uint32 index=0) const
 returns the object at the specified index. More...
 
virtual void setNumberOfInputs (ossim_int32 numberOfInputs)
 Will set the number of inputs. More...
 
virtual bool getInputListIsFixedFlag () const
 
virtual bool getOutputListIsFixedFlag () const
 
virtual void setNumberOfOutputs (ossim_int32 numberOfInputs)
 Will set the number of outputs. More...
 
const ConnectableObjectListgetInputList () const
 
const ConnectableObjectListgetOutputList () const
 
ConnectableObjectListgetInputList ()
 
ConnectableObjectListgetOutputList ()
 
 OSSIM_DEPRECATE_METHOD (virtual void findAllObjectsOfType(ConnectableObjectList &result, const RTTItypeid &typeInfo, bool recurse=true))
 
 OSSIM_DEPRECATE_METHOD (virtual void findAllObjectsOfType(ConnectableObjectList &result, const ossimString &className, bool recurse=true))
 
virtual void propagateEventToOutputs (ossimEvent &event)
 
virtual void propagateEventToInputs (ossimEvent &event)
 
virtual void setProperty (const ossimString &name, const ossimString &value)
 
virtual ossim_uint32 saveStateOfAllInputs (ossimKeywordlist &kwl, bool saveThisStateFlag=true, ossim_uint32 objectIndex=1, const char *prefix=0) const
 Save the state of all inputs to a keyword list. More...
 
virtual bool fillContainer (ossimConnectableContainer &container)
 Inserts this object and all of its children and inputs into the container provided. More...
 
bool moveInputUp (const ossimId &id)
 Moves the input connection matching id up one in the connection list. More...
 
bool moveInputDown (const ossimId &id)
 Moves the input connection matching id down one in the connection list. More...
 
bool moveInputToTop (const ossimId &id)
 Moves the input connection matching id to the top of the connection list. More...
 
bool moveInputToBottom (const ossimId &id)
 Moves the input connection matching id to the bottom of the connection list. More...
 
virtual void accept (ossimVisitor &visitor)
 We will add a visitor interface for all connectable objects. More...
 
- Public Member Functions inherited from ossimObject
 ossimObject ()
 
virtual ~ossimObject ()
 
virtual ossimObjectdup () const
 
virtual RTTItypeid getType () const
 
virtual bool canCastTo (ossimObject *obj) const
 
virtual bool canCastTo (const RTTItypeid &id) const
 
virtual bool canCastTo (const ossimString &parentClassName) const
 
virtual bool isEqualTo (const ossimObject &obj, ossimCompareType compareType=OSSIM_COMPARE_FULL) const
 
- Public Member Functions inherited from ossimReferenced
 ossimReferenced ()
 
 ossimReferenced (const ossimReferenced &)
 
ossimReferencedoperator= (const ossimReferenced &)
 
void ref () const
 increment the reference count by one, indicating that this object has another pointer which is referencing it. More...
 
void unref () const
 decrement the reference count by one, indicating that a pointer to this object is referencing it. More...
 
void unref_nodelete () const
 decrement the reference count by one, indicating that a pointer to this object is referencing it. More...
 
int referenceCount () const
 
- Public Member Functions inherited from ossimListenerManager
 ossimListenerManager ()
 
virtual ~ossimListenerManager ()
 
virtual void fireEvent (ossimEvent &event)
 
virtual bool addListener (ossimListener *listener)
 
virtual bool removeListener (ossimListener *listener)
 
virtual bool findListener (ossimListener *listener)
 
- Public Member Functions inherited from ossimPropertyInterface
 ossimPropertyInterface ()
 
virtual ~ossimPropertyInterface ()
 
virtual ossimString getPropertyValueAsString (const ossimString &name) const
 
void getPropertyList (std::vector< ossimRefPtr< ossimProperty > > &propertyList) const
 
void setProperties (std::vector< ossimRefPtr< ossimProperty > > &propertyList)
 
- Public Member Functions inherited from ossimErrorStatusInterface
 ossimErrorStatusInterface ()
 
virtual ~ossimErrorStatusInterface ()
 
virtual ossimErrorCode getErrorStatus () const
 
virtual ossimString getErrorStatusString () const
 
virtual void setErrorStatus (ossimErrorCode error_status) const
 
virtual void setErrorStatus () const
 
virtual void clearErrorStatus () const
 
bool hasError () const
 

Protected Member Functions

void allocate ()
 Allocates the tile. More...
 
- Protected Member Functions inherited from ossimImageHandler
virtual ossimRefPtr< ossimImageGeometrygetExternalImageGeometry () const
 Returns the image geometry object associated with this tile source or NULL if non defined. More...
 
virtual ossimRefPtr< ossimImageGeometrygetInternalImageGeometry () const
 
virtual bool getOverviewTile (ossim_uint32 resLevel, ossimImageData *result)
 Method to get an overview tile. More...
 
bool initVertices (const char *file)
 Opens file and attempts to initialize the valid image vertices. More...
 
virtual void completeOpen ()
 Will complete the opening process. More...
 
void initImageParameters (ossimImageGeometry *geom) const
 Convenience method to set things needed in the image geometry from the image handler. More...
 
virtual void establishDecimationFactors ()
 Virtual method determines the decimation factors at each resolution level. More...
 
virtual bool setOutputBandList (const std::vector< ossim_uint32 > &inBandList, std::vector< ossim_uint32 > &outBandList)
 Convenience method to set output band list. More...
 
void getFilenameWithNoExtension (ossimFilename &f) const
 Get filename with no extension, using supplentary directory for dirname if set. More...
 
- Protected Member Functions inherited from ossimImageSource
 ossimImageSource (const ossimImageSource &rhs)
 
const ossimImageSourceoperator= (const ossimImageSource &)
 
- Protected Member Functions inherited from ossimSource
 ossimSource (const ossimSource &rhs)
 
const ossimSourceoperator= (const ossimSource &rhs)
 
- Protected Member Functions inherited from ossimConnectableObject
ossimConnectableObjectfindObjectOfType (ConnectableObjectList *connectableList, ossimVisitor &visitor)
 
- Protected Member Functions inherited from ossimReferenced
virtual ~ossimReferenced ()
 
- Protected Member Functions inherited from ossimListenerManager
 ossimListenerManager (const ossimListenerManager &rhs)
 

Protected Attributes

std::vector< ossimStringm_renderableNames
 
ossimRefPtr< ossimHdf5m_hdf5
 
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
 
ossim_uint32 m_currentEntry
 
ossimRefPtr< ossimImageDatam_tile
 
std::mutex m_mutex
 
- Protected Attributes inherited from ossimImageHandler
ossimFilename theImageFile
 
ossimFilename theOverviewFile
 
ossimFilename theSupplementaryDirectory
 
ossimRefPtr< ossimImageHandlertheOverview
 
vector< ossimIpttheValidImageVertices
 
ossimImageMetaData theMetaData
 
ossimRefPtr< ossimImageGeometrytheGeometry
 
ossimRefPtr< ossimNBandLutDataObjecttheLut
 
std::vector< ossimDpttheDecimationFactors
 
ossimString theImageID
 
ossim_uint32 theStartingResLevel
 theStartingResLevel If set to something other than zero(default) this is indicative that the reader is an overview. More...
 
bool theOpenOverviewFlag
 If true opening of overviews will be attempted. More...
 
ossimPixelType thePixelType
 
std::shared_ptr< ossim::ImageHandlerState > m_state
 
- Protected Attributes inherited from ossimSource
bool theEnableFlag
 
bool theInitializedFlag
 
- Protected Attributes inherited from ossimConnectableObject
ossimId theId
 
ossimString theDescription
 
ossimObjecttheOwner
 
bool theInputListIsFixedFlag
 Indicates whether the theInputObjectList is fixed. More...
 
bool theOutputListIsFixedFlag
 Indicates whether the theOutputObjectList is fixed. More...
 
ConnectableObjectList theInputObjectList
 Holds a list of input objects. More...
 
ConnectableObjectList theOutputObjectList
 Holds a list of output objects. More...
 
- Protected Attributes inherited from ossimListenerManager
std::list< ossimListener * > theListenerList
 
bool theEnabledFlag
 
std::list< ossimListener * > theDelayedAdd
 
std::list< ossimListener * > theDelayedRemove
 
bool theFireEventFlag
 
- Protected Attributes inherited from ossimErrorStatusInterface
ossimErrorCode theErrorStatus
 

Friends

class ossimHdf5ImageDataset
 

Additional Inherited Members

- Public Types inherited from ossimImageHandler
enum  ossimImageHandlerOverviewCompressionType {
  OSSIM_OVERVIEW_COMPRESSION_NONE = 0, OSSIM_OVERVIEW_COMPRESSION_JPEG, OSSIM_OVERVIEW_COMPRESSION_LZW, OSSIM_OVERVIEW_COMPRESSION_DEFLATE,
  OSSIM_OVERVIEW_COMPRESSION_PACKBITS
}
 
- Public Types inherited from ossimConnectableObject
enum  ossimConnectableObjectDirectionType { CONNECTABLE_DIRECTION_NONE = 0, CONNECTABLE_DIRECTION_INPUT = 1, CONNECTABLE_DIRECTION_OUTPUT = 2 }
 
typedef std::vector< ossimRefPtr< ossimConnectableObject > > ConnectableObjectList
 

Detailed Description

This is the base class for all imagery using HDF5 as the file format.

HDF5 is unique in that it represents a variety of subformats for raster and projection information. The derived classes will need to specify the group and dataset names where the needed data lives.

Definition at line 26 of file ossimHdf5ImageHandler.h.

Constructor & Destructor Documentation

◆ ossimHdf5ImageHandler()

ossimHdf5ImageHandler::ossimHdf5ImageHandler ( )

default constructor

Definition at line 50 of file ossimHdf5ImageHandler.cpp.

52  m_entries(),
53  m_currentEntry(0),
54  m_tile(0),
55  m_mutex()
56 {
57 }
ossimRefPtr< ossimImageData > m_tile
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
ossimImageHandler()
Constructor (default):

◆ ~ossimHdf5ImageHandler()

ossimHdf5ImageHandler::~ossimHdf5ImageHandler ( )
virtual

virtual destructor

Definition at line 59 of file ossimHdf5ImageHandler.cpp.

References close(), and isOpen().

60 {
61  if (isOpen())
62  {
63  close();
64  }
65 }
virtual void close()
Close method.
virtual bool isOpen() const
Derived classes must implement this method to be concrete.

Member Function Documentation

◆ addRenderable()

void ossimHdf5ImageHandler::addRenderable ( const ossimString datasetName)
inline

Adds the dataset name, either the full HDF5 path or the simple object name, to the list of renderable datasets.

Definition at line 212 of file ossimHdf5ImageHandler.h.

Referenced by ossimHdf5Tool::loadImageFiles().

212 { m_renderableNames.push_back(datasetName); }
std::vector< ossimString > m_renderableNames

◆ allocate()

void ossimHdf5ImageHandler::allocate ( )
protected

Allocates the tile.

Definition at line 67 of file ossimHdf5ImageHandler.cpp.

References ossimImageDataFactory::create(), ossimImageData::initialize(), ossimImageDataFactory::instance(), m_mutex, and m_tile.

Referenced by getTile().

68 {
69  m_mutex.lock();
71  m_tile->initialize();
72  m_mutex.unlock();
73 }
ossimRefPtr< ossimImageData > m_tile
virtual void initialize()
Initialize the data buffer.
static ossimImageDataFactory * instance()
virtual ossimRefPtr< ossimImageData > create(ossimSource *owner, ossimScalarType scalar, ossim_uint32 bands=1) const

◆ close()

void ossimHdf5ImageHandler::close ( )
virtual

Close method.

Reimplemented from ossimImageHandler.

Definition at line 425 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::close(), m_entries, m_hdf5, m_tile, and ossimRefPtr< T >::valid().

Referenced by ~ossimHdf5ImageHandler().

426 {
427  // Close the datasets.
428  m_entries.clear();
429 
430  // Then the file.
431  if ( m_hdf5.valid() )
432  m_hdf5 = 0;
433 
434  // ossimRefPtr so assign to 0(unreferencing) will handle memory.
435  m_tile = 0;
436 
438 }
ossimRefPtr< ossimImageData > m_tile
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
bool valid() const
Definition: ossimRefPtr.h:75
ossimRefPtr< ossimHdf5 > m_hdf5
virtual void close()
Deletes the overview and clears the valid image vertices.

◆ getClassName()

ossimString ossimHdf5ImageHandler::getClassName ( ) const
virtual
Returns
"ossimH5Reader"

Reimplemented from ossimObject.

Definition at line 387 of file ossimHdf5ImageHandler.cpp.

388 {
389  return ossimString("ossimHdf5ImageHandler");
390 }

◆ getCurrentDataset()

ossimRefPtr< ossimHdf5ImageDataset > ossimHdf5ImageHandler::getCurrentDataset ( )

Definition at line 499 of file ossimHdf5ImageHandler.cpp.

References m_currentEntry, and m_entries.

500 {
501  if ( m_currentEntry >= m_entries.size() )
502  return 0;
503 
504  return m_entries[m_currentEntry];
505 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries

◆ getCurrentEntry()

ossim_uint32 ossimHdf5ImageHandler::getCurrentEntry ( ) const
virtual
Returns
The current entry number.

Reimplemented from ossimImageHandler.

Definition at line 494 of file ossimHdf5ImageHandler.cpp.

References m_currentEntry.

495 {
496  return m_currentEntry;
497 }

◆ getEntryList()

void ossimHdf5ImageHandler::getEntryList ( std::vector< ossim_uint32 > &  entryList) const
virtual
Parameters
entryListThis is the list to initialize with entry indexes.
Note
This implementation returns puts one entry "0" in the list.

Reimplemented from ossimImageHandler.

Definition at line 454 of file ossimHdf5ImageHandler.cpp.

References m_entries.

455 {
456  const ossim_uint32 SIZE = m_entries.size();
457  entryList.resize( SIZE );
458  for ( ossim_uint32 i = 0; i < SIZE; ++i )
459  {
460  entryList[i] = i;
461  }
462 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
unsigned int ossim_uint32

◆ getEntryNames()

void ossimHdf5ImageHandler::getEntryNames ( std::vector< ossimString > &  entryNames) const
virtual

Get the name of entry as a string.

Example given from HDF5 file:

entry_name: /All_Data/VIIRS-IMG-GTM-EDR-GEO_All/QF1_VIIRSGTMGEO

Parameters
entryIdxZero based entry index. If out of range name will be cleared.
nameInitialized by this.

Reimplemented from ossimImageHandler.

Definition at line 445 of file ossimHdf5ImageHandler.cpp.

References m_entries.

446 {
447  entryNames.clear();
448  for (ossim_uint32 i=0; i<m_entries.size(); ++i )
449  {
450  entryNames.push_back(m_entries[i]->getName());
451  }
452 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
unsigned int ossim_uint32

◆ getImageRectangle()

ossimIrect ossimHdf5ImageHandler::getImageRectangle ( ossim_uint32  reduced_res_level = 0) const
virtual

Returns the zero based image rectangle for the reduced resolution data set (rrds) passed in.

Note that rrds 0 is the highest resolution rrds.

Reimplemented from ossimImageHandler.

Definition at line 195 of file ossimHdf5ImageHandler.cpp.

References getNumberOfLines(), and getNumberOfSamples().

Referenced by getTile().

196 {
197  return ossimIrect(0,
198  0,
199  getNumberOfSamples(reduced_res_level) - 1,
200  getNumberOfLines(reduced_res_level) - 1);
201 }
virtual ossim_uint32 getNumberOfLines(ossim_uint32 reduced_res_level=0) const
Returns the number of lines in the image.
virtual ossim_uint32 getNumberOfSamples(ossim_uint32 reduced_res_level=0) const
Returns the number of samples in the image.

◆ getImageTileHeight()

ossim_uint32 ossimHdf5ImageHandler::getImageTileHeight ( ) const
virtual

Returns the tile width of the image or 0 if the image is not tiled.

Note: this is not the same as the ossimImageSource::getTileWidth which returns the output tile width which can be different than the internal image tile width on disk.

Implements ossimImageHandler.

Definition at line 372 of file ossimHdf5ImageHandler.cpp.

373 {
374  return 0; // Not tiled format.
375 }

◆ getImageTileWidth()

ossim_uint32 ossimHdf5ImageHandler::getImageTileWidth ( ) const
virtual

Returns the tile width of the image or 0 if the image is not tiled.

Note: this is not the same as the ossimImageSource::getTileWidth which returns the output tile width which can be different than the internal image tile width on disk.

Implements ossimImageHandler.

Definition at line 367 of file ossimHdf5ImageHandler.cpp.

368 {
369  return 0; // Not tiled format.
370 }

◆ getLongName()

ossimString ossimHdf5ImageHandler::getLongName ( ) const
virtual
Returns
"ossim hdf5"

Reimplemented from ossimObject.

Definition at line 382 of file ossimHdf5ImageHandler.cpp.

383 {
384  return ossimString("ossim hdf5 reader");
385 }

◆ getMaxPixelValue()

double ossimHdf5ImageHandler::getMaxPixelValue ( ossim_uint32  band = 0) const
virtual

Returns the max pixel of the band.

Reimplemented from ossimImageHandler.

Definition at line 512 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getMaxPixelValue(), m_currentEntry, and m_entries.

513 {
514  if ( m_currentEntry >= m_entries.size() )
515  {
516  if(m_entries[m_currentEntry]->isMaxPixelSet())
517  {
518  return m_entries[m_currentEntry]->getMaxPixelValue(band);
519  }
520  }
522 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
virtual double getMaxPixelValue(ossim_uint32 band=0) const
Returns the max pixel of the band.

◆ getMinPixelValue()

double ossimHdf5ImageHandler::getMinPixelValue ( ossim_uint32  band = 0) const
virtual

Retuns the min pixel value.

If there was an external eta data file then use the meta data from that file. If not given then we will return the default min

Reimplemented from ossimImageHandler.

Definition at line 524 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getMinPixelValue(), m_currentEntry, and m_entries.

525 {
526  if ( m_currentEntry >= m_entries.size() )
527  {
528  if(m_entries[m_currentEntry]->isMinPixelSet())
529  {
530  return m_entries[m_currentEntry]->getMinPixelValue(band);
531  }
532  }
534 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
virtual double getMinPixelValue(ossim_uint32 band=0) const
Retuns the min pixel value.

◆ getNullPixelValue()

double ossimHdf5ImageHandler::getNullPixelValue ( ossim_uint32  band = 0) const
virtual
Returns
Null pixel value.

Reimplemented from ossimImageHandler.

Reimplemented in ossimViirsHandler, and ossimViirsHandler.

Definition at line 507 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getNullPixelValue().

Referenced by getTile(), ossimHdf5ImageDataset::getTileBuf(), and ossimHdf5ImageDataset::scanForMinMax().

508 {
510 }
virtual double getNullPixelValue(ossim_uint32 band=0) const
Each band has a null pixel associated with it.

◆ getNumberOfEntries()

ossim_uint32 ossimHdf5ImageHandler::getNumberOfEntries ( ) const
virtual
Returns
The number of entries (images) in the image file.

Reimplemented from ossimImageHandler.

Definition at line 440 of file ossimHdf5ImageHandler.cpp.

References m_entries.

441 {
442  return (ossim_uint32)m_entries.size();
443 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
unsigned int ossim_uint32

◆ getNumberOfInputBands()

ossim_uint32 ossimHdf5ImageHandler::getNumberOfInputBands ( ) const
virtual

Returns the number of bands in the image.

Satisfies pure virtual from ImageHandler class.

Implements ossimImageSource.

Definition at line 392 of file ossimHdf5ImageHandler.cpp.

References m_currentEntry, and m_entries.

Referenced by getNumberOfOutputBands(), and getTile().

393 {
394  ossim_uint32 result = 1;
395 
396  if ( m_currentEntry < m_entries.size() )
397  result = m_entries[m_currentEntry]->getNumberOfBands();
398 
399  return result;
400 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
unsigned int ossim_uint32

◆ getNumberOfLines()

ossim_uint32 ossimHdf5ImageHandler::getNumberOfLines ( ossim_uint32  reduced_res_level = 0) const
virtual

Returns the number of lines in the image.

Satisfies pure virtual from ImageHandler class.

Implements ossimImageHandler.

Definition at line 335 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getNumberOfLines(), m_currentEntry, m_entries, ossimImageHandler::theOverview, and ossimRefPtr< T >::valid().

Referenced by getImageRectangle().

336 {
337  ossim_uint32 r = 0;
338  if (reduced_res_level == 0)
339  {
340  if (m_currentEntry < m_entries.size())
342  }
343  else if ( theOverview.valid() )
344  {
345  r = theOverview->getNumberOfLines(reduced_res_level);
346  }
347 
348  return r;
349 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
bool valid() const
Definition: ossimRefPtr.h:75
virtual ossim_uint32 getNumberOfLines(ossim_uint32 resLevel=0) const =0
Pure virtual, derived classes must implement.
unsigned int ossim_uint32
virtual ossim_uint32 getNumberOfLines(ossim_uint32 reduced_res_level=0) const
Returns the number of lines in the image.
ossimRefPtr< ossimImageHandler > theOverview

◆ getNumberOfOutputBands()

ossim_uint32 ossimHdf5ImageHandler::getNumberOfOutputBands ( ) const
virtual

Returns the number of bands in a tile returned from this TileSource.

Note: we are supporting sources that can have multiple data objects. If you want to know the scalar type of an object you can pass in the

Reimplemented from ossimImageSource.

Definition at line 402 of file ossimHdf5ImageHandler.cpp.

References getNumberOfInputBands().

Referenced by getTile().

403 {
404  // Currently not band selectable.
405  return getNumberOfInputBands();
406 }
virtual ossim_uint32 getNumberOfInputBands() const
Returns the number of bands in the image.

◆ getNumberOfSamples()

ossim_uint32 ossimHdf5ImageHandler::getNumberOfSamples ( ossim_uint32  reduced_res_level = 0) const
virtual

Returns the number of samples in the image.

Satisfies pure virtual from ImageHandler class.

Implements ossimImageHandler.

Definition at line 351 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getNumberOfSamples(), m_currentEntry, m_entries, ossimImageHandler::theOverview, and ossimRefPtr< T >::valid().

Referenced by getImageRectangle().

352 {
353  ossim_uint32 r = 0;
354  if (reduced_res_level == 0)
355  {
356  if (m_currentEntry < m_entries.size())
358  }
359  else if ( theOverview.valid() )
360  {
361  r = theOverview->getNumberOfSamples(reduced_res_level);
362  }
363 
364  return r;
365 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
bool valid() const
Definition: ossimRefPtr.h:75
unsigned int ossim_uint32
ossimRefPtr< ossimImageHandler > theOverview
virtual ossim_uint32 getNumberOfSamples(ossim_uint32 reduced_res_level=0) const
Returns the number of samples in the image.
virtual ossim_uint32 getNumberOfSamples(ossim_uint32 resLevel=0) const =0
Pure virtual, derived classes must implement.

◆ getOutputScalarType()

ossimScalarType ossimHdf5ImageHandler::getOutputScalarType ( ) const
virtual

Returns the output pixel type of the tile source.

Reimplemented from ossimImageSource.

Definition at line 408 of file ossimHdf5ImageHandler.cpp.

References m_currentEntry, m_entries, and OSSIM_SCALAR_UNKNOWN.

409 {
411 
412  if ( m_currentEntry < m_entries.size() )
413  {
414  result = m_entries[m_currentEntry]->getScalarType();
415  }
416 
417  return result;
418 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
ossimScalarType

◆ getProperty()

ossimRefPtr< ossimProperty > ossimHdf5ImageHandler::getProperty ( const ossimString name) const
virtual

Get propterty method.

Overrides ossimImageHandler::getProperty.

Parameters
nameProperty name to get.

Reimplemented from ossimImageHandler.

Definition at line 560 of file ossimHdf5ImageHandler.cpp.

References ossimString::string().

561 {
563  if ( name.string() == LAYER_KW )
564  {
565  if ( m_currentEntry < m_entries.size() )
566  {
567  ossimString value = m_entries[m_currentEntry]->getName();
568  prop = new ossimStringProperty(name, value);
569  }
570  }
571  else
572  {
573  prop = ossimImageHandler::getProperty(name);
574  }
575  return prop;
576 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
virtual ossimRefPtr< ossimProperty > getProperty(const ossimString &name) const
const std::string & string() const
Definition: ossimString.h:414

◆ getPropertyNames()

void ossimHdf5ImageHandler::getPropertyNames ( std::vector< ossimString > &  propertyNames) const
virtual

Get propterty names.

Overrides ossimImageHandler::getPropertyNames.

Parameters
propertyNamesArray to initialize.

Reimplemented from ossimImageHandler.

Definition at line 578 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::getPropertyNames().

579 {
580  propertyNames.push_back( ossimString("layer") );
582 }
virtual void getPropertyNames(std::vector< ossimString > &propertyNames) const

◆ getRenderableSetNames()

const std::vector<ossimString>& ossimHdf5ImageHandler::getRenderableSetNames ( )
inline

Definition at line 208 of file ossimHdf5ImageHandler.h.

Referenced by ossimHdf5PluginHandlerFactory::getSupportedRenderableNames().

208 { return m_renderableNames; }
std::vector< ossimString > m_renderableNames

◆ getShortName()

ossimString ossimHdf5ImageHandler::getShortName ( ) const
virtual
Returns
"hdf5"

Reimplemented from ossimObject.

Definition at line 377 of file ossimHdf5ImageHandler.cpp.

378 {
379  return ossimString("ossim_hdf5_reader");
380 }

◆ getTile() [1/2]

ossimRefPtr< ossimImageData > ossimHdf5ImageHandler::getTile ( const ossimIrect rect,
ossim_uint32  resLevel = 0 
)
virtual

Returns a pointer to a tile given an origin representing the upper left corner of the tile to grab from the image.

Satisfies pure virtual from TileSource class.

Reimplemented from ossimImageSource.

Definition at line 75 of file ossimHdf5ImageHandler.cpp.

References allocate(), ossimRefPtr< T >::get(), ossimDataObject::getDataObjectStatus(), m_mutex, m_tile, ossimImageData::makeBlank(), OSSIM_NULL, ossimImageData::setImageRectangle(), and ossimRefPtr< T >::valid().

77 {
78  if ( m_tile.valid() == false ) // First time through.
79  {
80  allocate();
81  }
82 
83  if (m_tile.valid())
84  {
85  // Image rectangle must be set prior to calling getTile.
86  m_mutex.lock();
88  m_mutex.unlock();
89 
90  if ( getTile( m_tile.get(), resLevel ) == false )
91  {
92  m_mutex.lock();
94  {
95  m_tile->makeBlank();
96  }
97  m_mutex.unlock();
98  }
99  }
100 
101  return m_tile;
102 }
void allocate()
Allocates the tile.
ossimRefPtr< ossimImageData > m_tile
virtual void setImageRectangle(const ossimIrect &rect)
bool valid() const
Definition: ossimRefPtr.h:75
virtual ossimDataObjectStatus getDataObjectStatus() const
virtual ossimRefPtr< ossimImageData > getTile(const ossimIrect &rect, ossim_uint32 resLevel=0)
Returns a pointer to a tile given an origin representing the upper left corner of the tile to grab fr...
virtual void makeBlank()
Initializes data to null pixel values.

◆ getTile() [2/2]

bool ossimHdf5ImageHandler::getTile ( ossimImageData result,
ossim_uint32  resLevel = 0 
)
virtual

Method to get a tile.

Parameters
resultThe tile to stuff. Note The requested rectangle in full image space and bands should be set in the result tile prior to passing. It will be an error if: result.getNumberOfBands() != this->getNumberOfOutputBands()
Returns
true on success false on error. If return is false, result is undefined so caller should handle appropriately with makeBlank or whatever.

Reimplemented from ossimImageSource.

Definition at line 104 of file ossimHdf5ImageHandler.cpp.

References ossimIrect::area(), ossimIrect::clipToRect(), ossimIrect::completely_within(), getImageRectangle(), ossimImageData::getImageRectangle(), getNullPixelValue(), ossimImageData::getNumberOfBands(), getNumberOfInputBands(), getNumberOfOutputBands(), ossimImageHandler::getOverviewTile(), ossim_hdf5::getScalarType(), isOpen(), ossimSource::isSourceEnabled(), ossimImageHandler::isValidRLevel(), ossimImageData::loadBand(), m_currentEntry, m_entries, m_mutex, ossimImageData::makeBlank(), OSSIM_FLOAT32, ossimReferenced::ref(), ossim::scalarSizeInBytes(), status, ossimReferenced::unref(), and ossimImageData::validate().

105 {
106  bool status = false;
107 
108  m_mutex.lock();
109 
110  //---
111  // Not open, this tile source bypassed, or invalid res level,
112  // return a blank tile.
113  //---
114  if( isOpen() && isSourceEnabled() && isValidRLevel(resLevel) &&
115  result && (result->getNumberOfBands() == getNumberOfOutputBands()) )
116  {
117  result->ref(); // Increment ref count.
118 
119  //---
120  // Check for overview tile. Some overviews can contain r0 so always
121  // call even if resLevel is 0. Method returns true on success, false
122  // on error.
123  //---
124  status = getOverviewTile(resLevel, result);
125 
126  if (!status) // Did not get an overview tile.
127  {
128  status = true;
129 
130  ossimIrect tile_rect = result->getImageRectangle();
131 
132  if ( ! tile_rect.completely_within(getImageRectangle(0)) )
133  {
134  // We won't fill totally so make blank first.
135  result->makeBlank();
136  }
137 
138  if (getImageRectangle(0).intersects(tile_rect))
139  {
140  // Make a clip rect.
141  ossimIrect clipRect = tile_rect.clipToRect(getImageRectangle(0));
142 
143  if (tile_rect.completely_within( clipRect) == false)
144  {
145  // Not filling whole tile so blank it out first.
146  result->makeBlank();
147  }
148 
149  // Create buffer to hold the clip rect for a single band.
150  ossim_uint32 clipRectSizeInBytes = clipRect.area() *
152  vector<char> dataBuffer(clipRectSizeInBytes);
153 
154  // Get the data.
155  for (ossim_uint32 band = 0; band < getNumberOfInputBands(); ++band)
156  {
157  // Hdf5 file to buffer:
158  m_entries[m_currentEntry]->getTileBuf(&dataBuffer.front(), clipRect, band);
159 #if 0
160  // Scan and fix non-standard null value:
162  {
163  const ossim_float32 NP = getNullPixelValue(band);
164  const ossim_uint32 COUNT = clipRect.area();
165  ossim_float32* float_buffer = (ossim_float32*)&dataBuffer.front();
166  for ( ossim_uint32 i = 0; i < COUNT; ++i )
167  {
168  if ( float_buffer[i] < -999.0 )
169  float_buffer[i] = NP;
170  }
171  }
172 #endif
173  // Buffer to tile:
174  result->loadBand((void*)&dataBuffer.front(), clipRect, band);
175  }
176 
177  // Validate the tile, i.e. full, partial, empty.
178  result->validate();
179  }
180  else // No intersection...
181  {
182  result->makeBlank();
183  }
184  }
185 
186  result->unref(); // Decrement ref count.
187  }
188 
189  m_mutex.unlock();
190 
191  return status;
192 }
virtual void loadBand(const void *src, const ossimIrect &src_rect, ossim_uint32 band)
virtual bool isSourceEnabled() const
Definition: ossimSource.cpp:79
virtual ossim_uint32 getNumberOfBands() const
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
virtual ossimIrect getImageRectangle(ossim_uint32 reduced_res_level=0) const
Returns the zero based image rectangle for the reduced resolution data set (rrds) passed in...
float ossim_float32
ossimScalarType getScalarType(const H5::DataSet *dataset)
32 bit floating point
void ref() const
increment the reference count by one, indicating that this object has another pointer which is refere...
virtual bool isValidRLevel(ossim_uint32 resLevel) const
Determines if the passed in reslution level is valid.
bool completely_within(const ossimIrect &rect) const
Definition: ossimIrect.cpp:425
virtual bool getOverviewTile(ossim_uint32 resLevel, ossimImageData *result)
Method to get an overview tile.
virtual ossimDataObjectStatus validate() const
virtual ossim_uint32 getNumberOfInputBands() const
Returns the number of bands in the image.
unsigned int ossim_uint32
virtual ossimIrect getImageRectangle() const
OSSIM_DLL ossim_uint32 scalarSizeInBytes(ossimScalarType scalarType)
ossimIrect clipToRect(const ossimIrect &rect) const
Definition: ossimIrect.cpp:501
virtual bool isOpen() const
Derived classes must implement this method to be concrete.
void unref() const
decrement the reference count by one, indicating that a pointer to this object is referencing it...
return status
virtual void makeBlank()
Initializes data to null pixel values.
virtual ossim_uint32 getNumberOfOutputBands() const
Returns the number of bands in a tile returned from this TileSource.
ossim_uint32 area() const
Definition: ossimIrect.h:396
virtual double getNullPixelValue(ossim_uint32 band=0) const

◆ isOpen()

bool ossimHdf5ImageHandler::isOpen ( ) const
virtual

Derived classes must implement this method to be concrete.

Returns
true if open, false if not.

Implements ossimImageHandler.

Definition at line 420 of file ossimHdf5ImageHandler.cpp.

References m_currentEntry, m_entries, m_hdf5, and ossimRefPtr< T >::valid().

Referenced by ossimViirsHandler::getImageGeometry(), getTile(), setCurrentEntry(), and ~ossimHdf5ImageHandler().

421 {
422  return ( m_hdf5.valid() && m_entries.size() && (m_currentEntry < m_entries.size()));
423 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
bool valid() const
Definition: ossimRefPtr.h:75
ossimRefPtr< ossimHdf5 > m_hdf5

◆ loadMetaData()

void ossimHdf5ImageHandler::loadMetaData ( )
virtual

There is an external file with an omd extension.

this file contains additional information about the image such as the null pixel, min and max values. For general raster it will contain much more than that.

Reimplemented from ossimImageHandler.

Definition at line 220 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::loadMetaData(), and m_tile.

221 {
222  m_tile = 0;
224 }
ossimRefPtr< ossimImageData > m_tile
virtual void loadMetaData()
There is an external file with an omd extension.

◆ loadState()

bool ossimHdf5ImageHandler::loadState ( const ossimKeywordlist kwl,
const char *  prefix = 0 
)
virtual

Method to the load (recreate) the state of an object from a keyword list.

Return true if ok or false on error.

Reimplemented from ossimImageHandler.

Definition at line 209 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::loadState(), and open().

211 {
212  if (ossimImageHandler::loadState(kwl, prefix))
213  {
214  return open();
215  }
216 
217  return false;
218 }
virtual bool loadState(const ossimKeywordlist &kwl, const char *prefix=0)
Method to the load (recreate) the state of an object from a keyword list.
virtual bool open()
The derived class needs to initialize the raster dataset names m_renderableNames in their constructor...

◆ open()

bool ossimHdf5ImageHandler::open ( )
virtual

The derived class needs to initialize the raster dataset names m_renderableNames in their constructor, for this method to work.

This should be implemented by the derived HDF5-format readers defined in plugins.

Returns
true on success, false on error.

Implements ossimImageHandler.

Definition at line 226 of file ossimHdf5ImageHandler.cpp.

Referenced by ossimHdf5Tool::loadImageFiles(), and loadState().

227 {
228  static const char* M = "ossimHdf5ImageHandler::open(filename) -- ";
229  if(traceDebug()) ossimNotify(ossimNotifyLevel_DEBUG) << M <<" Entering..." << std::endl;
230 
231  // Start with a clean slate.
232  if (isOpen())
233  {
234  close();
235  }
236 
237  // Check for empty filename.
238  if (theImageFile.empty())
239  return false;
240 
242  m_hdf5 = new ossimHdf5;
243  if (!m_hdf5->open(theImageFile))
244  {
245  if(traceDebug()) ossimNotify(ossimNotifyLevel_DEBUG) << M <<" Unable to open image Leaving..." << std::endl;
246  m_hdf5 = 0;
247  return false;
248  }
249 
250  if(traceDebug()) ossimNotify(ossimNotifyLevel_DEBUG) << M <<" Opened Image..." << std::endl;
251 
252  vector<H5::DataSet> datasetList;
253  H5::Group root;
254  m_hdf5->getRoot(root);
255  m_hdf5->getNdimDatasets(root, datasetList, true);
256 
257  if ( datasetList.empty() )
258  {
259  return false;
260  m_hdf5->close();
261  m_hdf5 = 0;
262  }
263  // Filter for specified renderable datasets:
264  if (m_renderableNames.size())
265  {
266  std::vector<H5::DataSet>::iterator dataset = datasetList.begin();
267  while (dataset != datasetList.end())
268  {
269  bool found=false;
270  ossimString dsName = dataset->getObjName();
271  std::vector<ossimString>::iterator name = m_renderableNames.begin();
272  while (name != m_renderableNames.end())
273  {
274  if (dsName.contains(*name))
275  {
276  found = true;
277  break;
278  }
279  ++name;
280  }
281  if (!found)
282  datasetList.erase(dataset);
283  else
284  ++dataset;
285  }
286  }
287 #if 0
288  ossimNotify(ossimNotifyLevel_DEBUG)<< "ossimHdf5ImageHandler:"<<__LINE__ << " DEBUG\nDataset names:\n";
289  for ( ossim_uint32 i = 0; i < datasetList.size(); ++i )
290  {
291  ossimNotify(ossimNotifyLevel_DEBUG)<< "dataset[" << i << "]: "
292  << datasetList[i].getObjName() << "\n";
293  }
294 #endif
295  if ( datasetList.empty() )
296  {
297  m_hdf5 = 0;
298  return false;
299  }
300 
301  // Add the image dataset entries.
302  std::vector<H5::DataSet>::iterator dataset = datasetList.begin();
303  while (dataset != datasetList.end())
304  {
306  oimgset->initialize(*dataset);
307  m_entries.push_back(oimgset);
308  ++dataset;
309  }
310 
311  // Initialize the current entry to be 0:
312  m_currentEntry = 999; // Forces init on change of index
313  setCurrentEntry(0);
314 
315  // Establish a common geometry for all entries. TODO: Need to verify if this is a kosher thing
316  // to do. It may be that multiple entries have different geometries associated.
318  if (!theGeometry.valid())
319  return false;
320 
321 #if 0 /* Please leave for debug. (drb) */
322  std::vector<ossimHdf5ImageDataset>::const_iterator i = m_entries.begin();
323  while ( i != m_entries.end() )
324  {
325  std::cout << (*i) << endl;
326  ++i;
327  }
328 #endif
329  if(traceDebug()) ossimNotify(ossimNotifyLevel_DEBUG) << M <<" Leaving..." << std::endl;
330 
331  return true;
332 }
bool initialize(const H5::DataSet &dataset)
Opens datasetName and initializes all data members on success.
ossimRefPtr< ossimImageGeometry > theGeometry
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
ossimFilename theImageFile
bool getRoot(H5::Group &root) const
Assigns the root group.
Definition: ossimHdf5.cpp:93
bool valid() const
Definition: ossimRefPtr.h:75
ossimFilename expand() const
Method to do file name expansion.
bool contains(char aChar) const
Definition: ossimString.h:58
ossimRefPtr< ossimHdf5 > m_hdf5
bool open(const ossimFilename &hdf5File)
Opens specified HDF5 file.
Definition: ossimHdf5.cpp:29
bool close()
Closes the file and deletes all pointers.
Definition: ossimHdf5.cpp:72
virtual ossimRefPtr< ossimImageGeometry > getImageGeometry()
Returns the image geometry object associated with this tile source or NULL if non defined...
unsigned int ossim_uint32
virtual void close()
Close method.
virtual bool isOpen() const
Derived classes must implement this method to be concrete.
virtual bool setCurrentEntry(ossim_uint32 entryIdx)
Low-level OSSIM interface to HDF5 libraries.
Definition: ossimHdf5.h:27
bool empty() const
Definition: ossimString.h:411
static bool getNdimDatasets(H5::Group group, std::vector< H5::DataSet > &datasetList, bool recursive=false)
Assigns list of all multi-dimensional datasets under current active group.
Definition: ossimHdf5.cpp:188
std::vector< ossimString > m_renderableNames
OSSIMDLLEXPORT std::ostream & ossimNotify(ossimNotifyLevel level=ossimNotifyLevel_WARN)

◆ saveState()

bool ossimHdf5ImageHandler::saveState ( ossimKeywordlist kwl,
const char *  prefix = 0 
) const
virtual

Method to save the state of an object to a keyword list.

Return true if ok or false on error.

Reimplemented from ossimImageHandler.

Definition at line 203 of file ossimHdf5ImageHandler.cpp.

References ossimImageHandler::saveState().

205 {
206  return ossimImageHandler::saveState(kwl, prefix);
207 }
virtual bool saveState(ossimKeywordlist &kwl, const char *prefix=0) const
Method to save the state of an object to a keyword list.

◆ setCurrentEntry()

bool ossimHdf5ImageHandler::setCurrentEntry ( ossim_uint32  entryIdx)
virtual
Parameters
entryIdxEntry number to select.
Note
The implementation does nothing. Derived classes that handle multiple images should override.
Returns
true if it was able to set the current entry and false otherwise.

Reimplemented from ossimImageHandler.

Definition at line 464 of file ossimHdf5ImageHandler.cpp.

References ossimString::clear(), ossimImageHandler::completeOpen(), isOpen(), ossimIrect::ll(), ossimIrect::lr(), m_currentEntry, m_entries, m_tile, ossimImageHandler::theOverviewFile, ossimImageHandler::theValidImageVertices, ossimIrect::ul(), and ossimIrect::ur().

465 {
466  bool result = true;
467  if (m_currentEntry != entryIdx)
468  {
469  // Entries always start at zero and increment sequentially..
470  if ( entryIdx < m_entries.size() )
471  {
473  m_currentEntry = entryIdx;
474  m_tile = 0;
475  ossimIrect validRect = m_entries[entryIdx]->getValidImageRect();
476  theValidImageVertices.clear();
477  theValidImageVertices.push_back(validRect.ul());
478  theValidImageVertices.push_back(validRect.ur());
479  theValidImageVertices.push_back(validRect.lr());
480  theValidImageVertices.push_back(validRect.ll());
481 
482  if ( isOpen() )
483  completeOpen();
484  }
485  else
486  {
487  result = false; // Entry index out of range.
488  }
489  }
490 
491  return result;
492 }
void clear()
Erases the entire container.
Definition: ossimString.h:432
ossimRefPtr< ossimImageData > m_tile
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
const ossimIpt & ul() const
Definition: ossimIrect.h:274
const ossimIpt & ll() const
Definition: ossimIrect.h:277
vector< ossimIpt > theValidImageVertices
const ossimIpt & lr() const
Definition: ossimIrect.h:276
virtual bool isOpen() const
Derived classes must implement this method to be concrete.
const ossimIpt & ur() const
Definition: ossimIrect.h:275
virtual void completeOpen()
Will complete the opening process.
ossimFilename theOverviewFile

◆ setProperty()

void ossimHdf5ImageHandler::setProperty ( ossimRefPtr< ossimProperty property)
virtual

Set propterty method.

Overrides ossimImageHandler::setProperty.

Current property name handled: "scale" One double value representing the scale in meters per pixel. It is assumed the scale is same for x and y direction.

Parameters
propertyto set.

Reimplemented from ossimImageHandler.

Definition at line 536 of file ossimHdf5ImageHandler.cpp.

References ossimProperty::getName(), ossimString::string(), and ossimRefPtr< T >::valid().

537 {
538  if ( !property.valid() )
539  return;
540 
541  if ( property->getName().string() == LAYER_KW )
542  {
543  ossimString s;
544  property->valueToString(s);
545  ossim_uint32 SIZE = (ossim_uint32)m_entries.size();
546  for ( ossim_uint32 i = 0; i < SIZE; ++i )
547  {
548  if ( m_entries[i]->getName() == s.string() )
549  {
550  setCurrentEntry( i );
551  }
552  }
553  }
554  else
555  {
557  }
558 }
std::vector< ossimRefPtr< ossimHdf5ImageDataset > > m_entries
bool valid() const
Definition: ossimRefPtr.h:75
virtual void setProperty(ossimRefPtr< ossimProperty > property)
unsigned int ossim_uint32
virtual bool setCurrentEntry(ossim_uint32 entryIdx)
const ossimString & getName() const
const std::string & string() const
Definition: ossimString.h:414

Friends And Related Function Documentation

◆ ossimHdf5ImageDataset

friend class ossimHdf5ImageDataset
friend

Definition at line 28 of file ossimHdf5ImageHandler.h.

Member Data Documentation

◆ m_currentEntry

ossim_uint32 ossimHdf5ImageHandler::m_currentEntry
protected

◆ m_entries

std::vector<ossimRefPtr<ossimHdf5ImageDataset> > ossimHdf5ImageHandler::m_entries
protected

◆ m_hdf5

ossimRefPtr<ossimHdf5> ossimHdf5ImageHandler::m_hdf5
protected

◆ m_mutex

std::mutex ossimHdf5ImageHandler::m_mutex
protected

Definition at line 223 of file ossimHdf5ImageHandler.h.

Referenced by allocate(), and getTile().

◆ m_renderableNames

std::vector<ossimString> ossimHdf5ImageHandler::m_renderableNames
protected

Definition at line 218 of file ossimHdf5ImageHandler.h.

Referenced by ossimViirsHandler::ossimViirsHandler().

◆ m_tile

ossimRefPtr<ossimImageData> ossimHdf5ImageHandler::m_tile
protected

Definition at line 222 of file ossimHdf5ImageHandler.h.

Referenced by allocate(), close(), getTile(), loadMetaData(), and setCurrentEntry().


The documentation for this class was generated from the following files: